[refactor] moving cubes into own package"

[fix] default parameter run records parameters in session for replay[fix] remove default parameters for several cubes

packages/cubes-core/cubes/apt/essentials/README.md

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+# apt:essentials
+
+**Install essential packages**
+
+## Purpose
+
+This cube installs a curated collection of essential development tools and utilities that are commonly needed for server environments and development workflows.
+
+## What This Cube Does
+
+Installs the following packages via apt:
+
+- **fish** - User-friendly command-line shell with autosuggestions and syntax highlighting
+- **ranger** - Terminal-based file manager with vi key bindings
+- **golang-go** - Go programming language compiler and tools
+- **build-essential** - Essential compilation tools (gcc, g++, make, etc.)
+- **python3** - Python 3 interpreter and standard library
+- **pkg-config** - Helper tool for compiling applications and libraries
+- **age** - Modern file encryption tool with small explicit keys
+
+## Configuration
+
+### Parameters
+
+- **UPDATE** (boolean, default: `true`)
+  - If already installed, should packages be updated?
+  - Set to `false` to skip package cache updates and only install missing packages
+
+## Dependencies
+
+None - this cube can run standalone.
+
+## Use Cases
+
+This cube is ideal as a base dependency for other cubes that require:
+- Basic development tools
+- Modern shell environments
+- File encryption capabilities
+- Python or Go runtimes

packages/cubes-core/cubes/apt/essentials/deploy.py

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+from pyinfra.operations import apt
+from pyinfra import host
+
+UPDATE = host.data.UPDATE
+
+apt.packages(
+    name='Install essentials',
+    packages=[
+        'fish',
+        'build-essential',
+        'python3',
+        'pkg-config',
+        'age'
+    ],
+    update=UPDATE,
+    _sudo=True
+)
+

packages/cubes-core/cubes/apt/essentials/manifest.mjs

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+import { Manifest } from '@bitsquare/nopy-cube';
+import { z } from 'zod';
+
+export default Manifest({
+  id: 'apt:essentials',
+  name: 'Install essential packages',
+  dependencies: () => [],
+  schema: z.object({
+    UPDATE: z.boolean().describe('If already installed should packages be updated').default(true),
+  }),
+});